circRNA basic information
circBase ID: hsa_circ_0017620
Name: hsa_circ_SFMBT2
Synonym: -
Host Gene: SFMBT2
Genomic location(hg19): chr10:7239509-7327916:-
Genomic location(hg38): chr10:7197547-7285954:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent normal tissues; tumor tissues; adjacent tissues

Cell lines:

HBE; A549; HCC827; H460; Calu-3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: KRT5
Associated microRNA: miR-520a-5p
Biological function: Promotes NSCLC cell proliferation, migration, invasion, and tumor growth; silencing inhibits these phenotypes.
Molecular mechanism: Acts as a competing endogenous RNA binding miR-520a-5p to regulate KRT5 expression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Transfection; EdU Staining; Colony Formation Assay; MTT; Transwell Assay; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

providing a potential new target for the treatment and diagnosis of NSCLC

Description:

hsa_circ_0017620 is up-regulated in NSCLC tissues and cell lines and promotes proliferation, migration/invasion and in vivo tumor growth. Mechanistically, it functions as a ceRNA by sponging miR-520a-5p to increase KRT5, and miR-520a-5p inhibition or KRT5 overexpression rescues the effects of hsa_circ_0017620 knockdown.

Confidence score:

0.7856

Other information
Title:

Hsa_circRNA_0017620 regulated cell progression of non-small-cell lung cancer via miR-520a-5p/KRT5 axis.

Journal: Journal of clinical laboratory analysis
Published: 2022
PubMed ID: 35302673
Study type:

combined biological and clinical study

Data availability: Not Applicable.
Code availability: -