circRNA basic information
circBase ID: hsa_circ_0000274
Name: hsa_circ_NUP98
Synonym: circRNA nucleoporin 98 (circNUP98)
Host Gene: NUP98
Genomic location(hg19): chr11:3752620-3774638:-
Genomic location(hg38): chr11:3731390-3753408:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005086
MONDO name: renal cell carcinoma
Disease details: renal cell carcinoma / RCC
Disease DO ID:
4450
Disease MeSH ID:
D002292
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

RCC tissues; adjacent non-tumor tissues; xenograft tumors

Cell lines:

786-O; A498; HK2; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NUCB2 protein, JAK1, STAT3
Associated microRNA: miR-338-3p
Biological function: Promotes RCC cell viability, colony formation, migration, invasion, angiogenesis and tumor formation; inhibits apoptosis.
Molecular mechanism: circ_0000274 acts as a ceRNA by sponging miR-338-3p to positively regulate NUCB2 protein and activates the JAK1/STAT3 protein signaling pathway.
Biological pathway or process:

JAK/STAT (promotes); ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); apoptosis (inhibits); metastasis (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Tube Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

High circ_0000274 expression was linked to advanced TNM stage and metastasis in RCC; it might provide a promising target for RCC treatment.

Description:

circ_0000274 is up-regulated in RCC tissues and cells and acts as an oncogenic circRNA. It promotes RCC growth, migration, invasion, angiogenesis and in vivo tumor formation while suppressing apoptosis through the miR-338-3p/NUCB2 axis and activation of JAK1/STAT3 signaling. Its higher expression is associated with advanced TNM stage and metastasis.

Confidence score:

0.8006

Other information
Title:

Circ_0000274 contributes to renal cell carcinoma progression by regulating miR-338-3p/NUCB2 axis and JAK1/STAT3 pathway.

Journal: Transplant immunology
Published: 2022
PubMed ID: 35569717
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request; Supplementary data to this article can be found online at https://doi. org/10.1016/j.trim.2022.101626.
Code availability: -