circRNA basic information
circBase ID: -
Name: hsa_circ_FADS2
Synonym: hsa_circRNA_100833
Host Gene: FADS2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tumor tissue; adjacent normal tissue

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: APLN
Associated microRNA: hsa-miR-124-5p
Biological function: Potential diagnostic biomarker for CRC (high diagnostic efficiency by ROC); suggested involvement in CRC pathogenesis.
Molecular mechanism: Predicted ceRNA network (cirReNET): circRNA sponging miRNAs to regulate target mRNAs; predicted core axis hsa_circRNA_100833-hsa-miR-124-5p-APLN.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Diagnostic marker for CRC (ROC AUC = 0.6860).

Description:

hsa_circRNA_100833 (host gene FADS2) is up-regulated in CRC tumor tissues versus adjacent normal tissues and shows diagnostic value by ROC analysis. The study predicts it may act in a circRNA-miRNA-mRNA ceRNA network, with a proposed core axis hsa_circRNA_100833-hsa-miR-124-5p-APLN, but the mechanism is not experimentally validated.

Confidence score:

0.5963

Other information
Title:

Potential and functional prediction of six circular RNAs as diagnostic markers for colorectal cancer.

Journal: PeerJ
Published: 2022
PubMed ID: 35611168
Study type:

combined biological and clinical study

Data availability: GSE197991; Supplemental File
Code availability: -