circRNA basic information
circBase ID: hsa_circ_0000129
Name: hsa_circ_TMOD4
Synonym: circ_0000129
Host Gene: TMOD4
Genomic location(hg19): chr1:151145974-151149507:-
Genomic location(hg38): chr1:151173498-151177031:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC specimens; paired normal specimens; xenograft tumor tissues

Cell lines:

MDA-MB-231; MCF-7; MCF-10A; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SPIN1
Associated microRNA: miR-485-3p
Biological function: promotes BC cell proliferation, migration, invasion, angiopoiesis, and tumor growth; inhibits apoptosis
Molecular mechanism: circ_0000129 acts as a miR-485-3p sponge to upregulate SPIN1 expression, thereby promoting BC progression
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); angiogenesis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Tube Formation Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circ_0000129 was overexpressed in BC specimens compared with paired normal specimens

Description:

hsa_circ_0000129/circ_0000129 is up-regulated in breast cancer tissues and cell lines. It promotes malignant breast cancer phenotypes, including proliferation, migration, invasion, angiopoiesis, and xenograft tumor growth, while suppressing apoptosis. Mechanistically, it localizes mainly in the cytoplasm and acts as a miR-485-3p sponge to relieve miR-485-3p-mediated repression of SPIN1.

Confidence score:

0.8512

Other information
Title:

Hsa_circ_0000129 drives tumor growth via sequestering miR-485-3p and upregulating SPIN1 in breast cancer.

Journal: Journal of biochemical and molecular toxicology
Published: 2023
PubMed ID: 36426627
Study type:

combined biological and clinical study

Data availability: GSE111504; analyzed data sets generated during the present study are available from the corresponding author upon reasonable request
Code availability: -