circRNA basic information
circBase ID: -
Name: hsa_circ_TPST2
Synonym: hsa_circ_103188 / circTPST2
Host Gene: TPST2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0010150
MONDO name: head and neck squamous cell carcinoma
Disease details: head and neck squamous cell carcinoma / HNSCC
Disease DO ID:
5520
Disease MeSH ID:
C535575
Disease NCIt ID:
C34447
Disease ICD11 ID:
-
Disease OMIM ID:
275355
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent tissues

Cell lines:

HOK; UM1; UM2; HSC-3; HSC-4; CAL27; HN12; HN31

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Nucleolin, hnRNPm
Associated microRNA: miR-770-5p, miR-370-3p
Biological function: inhibits cisplatin sensitivity; promotes chemoresistance; inhibits apoptosis and DNA damage after cisplatin
Molecular mechanism: circTPST2 sponges miR-770-5p and physically interacts with Nucleolin, increasing Nucleolin expression and reducing cisplatin chemosensitivity
Biological pathway or process:

chemoresistance (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Clinical Sample Validation; Bioinformatics Analysis; RIP (RNA Immunoprecipitation); RNA Pull-Down; Western Blot; Transfection; CCK8; Annexin V/PI Flow Cytometry; IHC (Immunohistochemistry); Survival Analysis

Clinical significance:

High circTPST2 expression correlated with lower overall survival rates in chemotherapeutic HNSCC patients; potential marker for selecting chemotherapy regimens in HNSCC patients

Description:

circTPST2 (hsa_circ_103188), derived from TPST2, is up-regulated in HNSCC and reduces cisplatin sensitivity. It promotes chemoresistance by sponging miR-770-5p and physically interacting with Nucleolin, increasing Nucleolin expression and suppressing apoptosis/DNA damage under cisplatin treatment. High circTPST2 expression is associated with worse overall survival in chemotherapeutic HNSCC cohorts.

Confidence score:

0.8769

Other information
Title:

Circular RNA from Tyrosylprotein Sulfotransferase 2 Gene Inhibits Cisplatin Sensitivity in Head and Neck Squamous Cell Carcinoma by Sponging miR-770-5p and Interacting with Nucleolin.

Journal: Cancers
Published: 2023
PubMed ID: 38001611
Study type:

combined biological and clinical study

Data availability: GSE200946
Code availability: -