circRNA basic information
circBase ID: hsa_circ_0007967
Name: hsa_circ_ATF2
Synonym: -
Host Gene: ATF2
Genomic location(hg19): chr2:175976295-175986268:-
Genomic location(hg38): chr2:175111567-175121540:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues

Cell lines:

BGC823; SGC7901; MGC803; HGC27; AGS; MKN87; GES1; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MAML3, AGO2
Associated microRNA: miR-411-5p
Biological function: Promotes gastric cancer cell proliferation in vitro and in vivo.
Molecular mechanism: Acts as a miRNA sponge for miR-411-5p, thereby increasing MAML3 expression.
Biological pathway or process:

proliferation (promotes); ceRNA regulation (promotes); Notch (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Northern Blot; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Western Blot; Clinical Sample Validation; In Vivo Animal Model

Clinical significance:

A promising biomarker for gastric cancer diagnosis and prognosis, and a potential therapeutic target.

Description:

hsa_circ_0007967 is up-regulated in gastric cancer tissues and cell lines. It mainly localizes to the cytoplasm and promotes gastric cancer cell proliferation in vitro and in a cell line-derived xenograft model by sponging miR-411-5p, thereby increasing MAML3 expression (a Notch-related transcriptional co-activator).

Confidence score:

0.8339

Other information
Title:

Hsa_circ_0007967 promotes gastric cancer proliferation through the miR-411-5p/MAML3 axis.

Journal: Cell death discovery
Published: 2022
PubMed ID: 35354791
Study type:

combined biological and clinical study

Data availability: The data supporting the conclusion of this article are presented within the article and its additional files.
Code availability: -