circRNA basic information
circBase ID: -
Name: -
Synonym: circ_1306
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues; tumour tissues

Cell lines:

L02; SK-HEP-1; Hep G2; Huh-7; Hep 3B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CDK16
Associated microRNA: miR-584-5p
Biological function: Promotes HCC cell proliferation and tumour growth; inhibits apoptosis.
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-584-5p to up-regulate CDK16.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); TUNEL; Clinical Sample Validation

Clinical significance:

Provided as a novel marker/target for HCC diagnosis and treatment.

Description:

circ_1306 (circRNA 001306) is up-regulated in HCC tissues and cell lines and promotes proliferation and tumour growth while inhibiting apoptosis. Mechanistically, it sponges miR-584-5p to de-repress CDK16, forming a circ_1306/miR-584-5p/CDK16 axis with potential diagnostic/therapeutic relevance in HCC.

Confidence score:

0.7954

Other information
Title:

circRNA 001306 enhances hepatocellular carcinoma growth by up-regulating CDK16 expression via sponging miR-584-5p.

Journal: Journal of cellular and molecular medicine
Published: 2020
PubMed ID: 33135290
Study type:

combined biological and clinical study

Data availability: GSE94508; GSE108724; GSE101728
Code availability: -