circRNA basic information
circBase ID: hsa_circ_0006948
Name: hsa_circ_FNDC3B
Synonym: circ_0006948
Host Gene: FNDC3B
Genomic location(hg19): chr3:171830241-171944737:+
Genomic location(hg38): chr3:172112451-172226947:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: Esophageal squamous cell carcinoma
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tumor tissues; adjacent normal tissues

Cell lines:

HET-1A; TE-1; KYSE30; EC109

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LASP1
Associated microRNA: miR-3612
Biological function: Promotes ESCC cell viability, colony formation, migration, invasion, glycolysis and tumor growth, and inhibits apoptosis.
Molecular mechanism: circ_0006948 acts as a ceRNA/miRNA sponge for miR-3612 to upregulate LASP1 expression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); glycolysis (promotes); ceRNA regulation (other); metastasis (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0006948 expression was associated with shorter overall survival in ESCC patients and may be a potential biomarker or therapeutic target.

Description:

circ_0006948 is up-regulated in ESCC tissues and cells, and high expression is associated with shorter overall survival. Functionally, circ_0006948 promotes ESCC proliferation, migration, invasion, glycolysis and in vivo tumor growth while inhibiting apoptosis. Mechanistically, it acts as a cytoplasmic ceRNA by sponging miR-3612 to increase LASP1 expression.

Confidence score:

0.8174

Other information
Title:

Circular RNA circ_0006948 Promotes Esophageal Squamous Cell Carcinoma Progression by Regulating microRNA-3612/LASP1 Axis.

Journal: Digestive diseases and sciences
Published: 2022
PubMed ID: 34024023
Study type:

combined biological and clinical study

Data availability: Supplementary material available at https:// doi. org/ 10. 1007/ s10620-021-07057-4
Code availability: -