circRNA basic information
circBase ID: hsa_circ_0046600
Name: hsa_circ_B3GNTL1
Synonym: Circ_0046600
Host Gene: B3GNTL1
Genomic location(hg19): chr17:80962990-80992975:-
Genomic location(hg38): chr17:83005114-83035099:-
Subcellular localization: cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tumor tissues; matched non-cancer tissues; tumors

Cell lines:

HCCLM3; MHCC97H; SNU-387; Huh-7; THLE-2

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SERBP1
Associated microRNA: miR-1258
Biological function: Promotes HCC cell growth, proliferation, colony formation, cell cycle progression, migration, invasion, EMT progression, metastasis and tumor growth; inhibits apoptosis.
Molecular mechanism: circ_0046600 functions as a cytoplasmic ceRNA/miRNA sponge that competitively binds miR-1258, thereby up-regulating SERBP1; circ_0046600 can also be packaged into exosomes and released from HCC cells.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; In Vivo Animal Model

Clinical significance:

-

Description:

circ_0046600 is up-regulated in HCC tissues and cells and acts as a tumor-promoting circRNA. It promotes HCC growth, metastasis and EMT while inhibiting apoptosis through a circ_0046600/miR-1258/SERBP1 ceRNA axis. The study also shows that circ_0046600 can be packaged into exosomes derived from HCC cells.

Confidence score:

0.8124

Other information
Title:

Circ_0046600 promotes hepatocellular carcinoma progression via up-regulating SERBP1 through sequestering miR-1258.

Journal: Pathology, research and practice
Published: 2021
PubMed ID: 34784519
Study type:

combined biological and clinical study

Data availability: Supplementary data associated with this article can be found in the online version at doi:10.1016/j.prp.2021.153681.
Code availability: -