circRNA basic information
circBase ID: hsa_circ_0096754
Name: hsa_circ_FAT3
Synonym: FAT atypical cadherin 3 (FAT3) circRNA / circ-FAT3
Host Gene: FAT3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008903
MONDO name: lung cancer
Disease details: lung cancer
Disease DO ID:
1324
Disease MeSH ID:
-
Disease NCIt ID:
C7377
Disease ICD11 ID:
-
Disease OMIM ID:
211980
Species: Human
Species details: Homo sapiens
Tissue specimen:

paraneoplastic normal tissues; lung cancer tissues; human lung cancer and normal tissues; lung tissues

Cell lines:

A549; H446

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HuR, ELAV like RNA binding protein 1, FAT3 mRNA
Associated microRNA: miR-136-5p
Biological function: promotes lung cancer cell proliferation, invasion, growth and metastasis; stable knockdown inhibits cell proliferation and metastasis both in vitro and in vivo
Molecular mechanism: HuR binds introns flanking circ-FAT3 to promote circ-FAT3 cyclization and generation; circ-FAT3 acts as a ceRNA sponging miR-136-5p to alleviate repression of HuR mRNA, forming a positive feedback loop
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); invasion (promotes); metastasis (promotes); mRNA stability (other)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ-FAT3 was closely linked to larger tumor size, lymph node metastasis, later clinical stage and dismal outcome; patients with high circ-FAT3 had shorter overall and relapse-free survival time

Description:

circ-FAT3 is a human FAT3-derived oncogenic circRNA that is upregulated in lung cancer and associated with larger tumor size, lymph node metastasis, advanced TNM stage, and poorer survival. It promotes lung cancer proliferation, invasion, tumor growth, and metastasis by sponging miR-136-5p to increase HuR expression, while HuR in turn enhances circ-FAT3 biogenesis by binding flanking introns, forming a positive feedback loop.

Confidence score:

0.8226

Other information
Title:

A circular RNA derived from FAT atypical cadherin 3 promotes lung cancer progression via forming a regulatory loop with oncogenic ELAV like RNA binding protein 1.

Journal: Journal of biochemistry
Published: 2022
PubMed ID: 34647573
Study type:

combined biological and clinical study

Data availability: circAtlas2.0 database (http://circatlas.biols.ac.cn/)
Code availability: -