circRNA basic information
circBase ID: -
Name: hsa_circ_NEK6
Synonym: hsa-circ-104916
Host Gene: NEK6
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancer specimens; adjacent normal tissues / adjacent noncancerous tissue samples; tumor tissue

Cell lines:

AGS; MKN-28; NCI-N87; MKN-45; GES-1; BGC823; MGC803; SGC7901

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: E-cadherin, N-cadherin, Vimentin, Slug
Associated microRNA: -
Biological function: Suppresses proliferation, migration and invasion of gastric cancer cells; inhibits EMT.
Molecular mechanism: Circ-104916 overexpression alters EMT marker expression (E-cadherin up; N-cadherin, Vimentin, Slug down), suggesting inhibition of EMT (possibly via decreasing Slug).
Biological pathway or process:

EMT (inhibits); migration (inhibits); invasion (inhibits); proliferation (inhibits)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; divergent primers PCR; Clinical Sample Validation; Transfection; CCK8; Transwell Assay; Western Blot

Clinical significance:

Lower circ-104916 expression is associated with deeper invasion depth, higher tumor stage and more frequent lymphatic metastasis; potential biomarker for GC.

Description:

Circ-104916 (circNEK6) is down-regulated in gastric cancer tissues and cell lines. Its overexpression suppresses gastric cancer cell proliferation, migration, and invasion, at least partly by inhibiting EMT and shifting EMT markers (E-cadherin up; N-cadherin/Vimentin/Slug down). Low circ-104916 is associated with more aggressive clinicopathological features, supporting its potential as a GC biomarker and tumor suppressor.

Confidence score:

0.6537

Other information
Title:

Circ-104916 is downregulated in gastric cancer and suppresses migration and invasion of gastric cancer cells.

Journal: OncoTargets and therapy
Published: 2017
PubMed ID: 28761361
Study type:

combined biological and clinical study

Data availability: -
Code availability: -