circRNA basic information
circBase ID: hsa_circ_0043278
Name: hsa_circ_TADA2A
Synonym: -
Host Gene: TADA2A
Genomic location(hg19): chr17:35797838-35800763:+
Genomic location(hg38): chr17:37437737-37440662:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissue specimens; paired adjacent normal tissue specimens

Cell lines:

MCF-7; MDA-MB-231; MCF-10A

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: May serve a role in BC tumorigenesis as a transcriptional regulator (based on ceRNA network and enrichment analyses).
Molecular mechanism: ceRNA mechanism (predicted miRNA sponging) with downstream target mRNAs inferred by bioinformatics; PI3K-AKT pathway enrichment among predicted targets; ORF predicted (possible translation).
Biological pathway or process:

PI3K/AKT (other); stemness (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; divergent primers PCR; Sanger Sequencing; Clinical Sample Validation

Clinical significance:

Potential diagnostic biomarkers for patients with BC (suggested).

Description:

hsa_circ_0043278 (circTADA2A) is down-regulated in breast cancer tissues and cell lines. The paper predicts it functions within a circRNA-miRNA-mRNA ceRNA network, with enrichment implicating PI3K-AKT signaling and stem-cell pluripotency regulation among associated pathways; an ORF is predicted suggesting possible translation.

Confidence score:

0.5541

Other information
Title:

Analysis of circular RNA-associated competing endogenous RNA network in breast cancer.

Journal: Oncology letters
Published: 2020
PubMed ID: 32002039
Study type:

combined biological and clinical study

Data availability: GSE101124
Code availability: -