circRNA basic information
circBase ID: hsa_circ_0040809
Name: -
Synonym: circ_0040809
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancerous tissues; paracancerous tissues; CRC tissues; adjacent tissues; normal colorectal tissue samples

Cell lines:

HT29; HCT-116; SW480; LoVo; NCM460; HEK-293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: DNMT1, DNMT1 mRNA
Associated microRNA: miR-515-5p
Biological function: circ_0040809 promotes CRC cell proliferation and migration, inhibits apoptosis, and facilitates malignant phenotypes of CRC cells.
Molecular mechanism: circ_0040809 functions as a ceRNA/miRNA sponge for miR-515-5p, thereby increasing DNMT1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); apoptosis (inhibits); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; Luciferase Reporter Assay; Nuclear-Cytoplasmic Fractionation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ_0040809 expression is significantly associated with shorter overall survival and may be a promising prognostic biomarker and therapy target for CRC.

Description:

circ_0040809 is up-regulated in colorectal cancer tissues and cell lines, and high expression is associated with shorter overall survival. Functionally, it promotes CRC cell proliferation and migration and suppresses apoptosis. Mechanistically, circ_0040809 acts as a miR-515-5p sponge to increase DNMT1 expression, supporting malignant CRC phenotypes.

Confidence score:

0.7474

Other information
Title:

Hsa_circ_0040809 regulates colorectal cancer development by upregulating methyltransferase DNMT1 via targeting miR-515-5p.

Journal: The journal of gene medicine
Published: 2021
PubMed ID: 34438465
Study type:

combined biological and clinical study

Data availability: GSE142837; GSE138589; The data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -