circRNA basic information
circBase ID: hsa_circ_0016788
Name: hsa_circ_TRIM11
Synonym: circRNA_0016788
Host Gene: TRIM11
Genomic location(hg19): chr1:228581376-228594517:-
Genomic location(hg38): chr1:228393675-228406816:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal tissue; tumor tissues

Cell lines:

Huh7; Hep3B; THLE-2; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PARP14, PKM2, PCNA, Bcl-2, Bax, Ki67
Associated microRNA: miR-506-3p
Biological function: Facilitates HCC development; promotes glycolysis metabolism, cell vitality, cell proliferation, colony formation, invasion, and xenograft tumor growth; inhibits apoptosis.
Molecular mechanism: hsa_circ_0016788 acts as a miR-506-3p sponge to increase PARP14 expression, thereby regulating HCC progression.
Biological pathway or process:

ceRNA regulation (promotes); glycolysis (promotes); proliferation (promotes); invasion (promotes); apoptosis (inhibits); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

Potential targeted therapy for HCC treatment.

Description:

hsa_circ_0016788 is up-regulated in HCC tissues and HCC cell lines. It promotes HCC progression by sponging miR-506-3p and increasing PARP14 expression, thereby enhancing glycolysis, proliferation, colony formation, invasion, and tumor growth while suppressing apoptosis. The study suggests that hsa_circ_0016788 may represent a potential therapeutic target for HCC.

Confidence score:

0.8299

Other information
Title:

Hsa_circ_0016788 regulates hepatocellular carcinoma progression via miR-506-3p/poly-adenosine diphosphate-ribose polymerase.

Journal: Journal of gastroenterology and hepatology
Published: 2021
PubMed ID: 34340259
Study type:

combined biological and clinical study

Data availability: Supporting Information; Figure S1
Code availability: -