circRNA basic information
circBase ID: hsa_circ_0001361
Name: hsa_circ_FNDC3B
Synonym: circFNDC3B
Host Gene: FNDC3B
Genomic location(hg19): chr3:171830241-171851336:+
Genomic location(hg38): chr3:172112451-172133546:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007576
MONDO name: esophageal cancer
Disease details: esophageal cancer
Disease DO ID:
5041
Disease MeSH ID:
-
Disease NCIt ID:
C7478
Disease ICD11 ID:
669033105
Disease OMIM ID:
133239
Species: Human
Species details: Homo sapiens
Tissue specimen:

esophageal cancer tissues; adjacent normal tissues

Cell lines:

ECA109; KYSE150

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: promotes esophageal cancer cell proliferation, migration, and invasion; inhibits apoptosis
Molecular mechanism: gene silencing of circFNDC3B inhibited proliferation, increased apoptosis, and reduced migration and invasion; specific downstream molecular mechanism was not determined
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Transfection; Annexin V/PI Flow Cytometry; Transwell Assay; H&E Staining

Clinical significance:

circFNDC3B might be developed as a novel esophageal marker and may provide a basis for application of circular RNAs in cancer diagnosis and treatment

Description:

circFNDC3B, a circRNA generated from FNDC3B exons, is up-regulated in esophageal cancer tissues. Functional silencing experiments in ECA109 and KYSE150 cells indicate that circFNDC3B promotes proliferation, migration, and invasion while suppressing apoptosis, supporting a pro-progression role in esophageal cancer.

Confidence score:

0.7039

Other information
Title:

CircRNA circFNDC3B promotes esophageal cancer progression via cell proliferation, apoptosis, and migration regulation.

Journal: International journal of clinical and experimental pathology
Published: 2018
PubMed ID: 31949813
Study type:

combined biological and clinical study

Data availability: -
Code availability: -