circRNA basic information
circBase ID: -
Name: hsa_circ_LARP4
Synonym: circLARP4 / hsa_circ_101057
Host Gene: LARP4
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; human tissue microarray

Cell lines:

GES-1; SGC-7901; MKN-45; MKN-28; HGC-27; MGC-803; AGS; BGC-823; HEK-293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: LATS1, YAP, p-YAP, AGO2
Associated microRNA: miR-424 / has-miR-424-5p
Biological function: circLARP4 functions as a tumor suppressive factor in gastric cancer cells, inhibiting DNA synthesis, cell proliferation, colony formation and invasion.
Molecular mechanism: circLARP4 acts as a ceRNA/miRNA sponge for miR-424, thereby regulating LATS1 and downstream YAP/p-YAP signaling in gastric cancer cells.
Biological pathway or process:

Hippo/YAP (inhibits); proliferation (inhibits); invasion (inhibits); ceRNA regulation (promotes); drug response (promotes)

Detected method:
Q
H
M
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Microarray; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; MTT; EdU Staining; Colony Formation Assay; Transwell Assay; Western Blot; Cohort Study; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circLARP4 was downregulated in GC tissues, negatively associated with tumor size and lymphatic metastasis, predicted longer overall survival when highly expressed, and acted as an independent prognostic factor for OS; high expression was also associated with more favorable therapeutic outcome after oxaliplatin and 5-Fu adjuvant chemotherapy.

Description:

circLARP4 is a human LARP4-derived circRNA that is downregulated in gastric cancer tissues and cell lines. It mainly localizes in the cytoplasm and suppresses GC cell proliferation and invasion by sponging miR-424 and regulating the LATS1/YAP pathway. Clinically, higher circLARP4 expression is associated with longer overall survival and more favorable therapeutic outcome after oxaliplatin and 5-Fu chemotherapy.

Confidence score:

0.874

Other information
Title:

Circular RNA circNEURL4 inhibits cell proliferation and invasion of papillary thyroid carcinoma by sponging miR-1278 and regulating LATS1 expression.

Journal: American journal of translational research
Published: 2021
PubMed ID: 34306334
Study type:

combined biological and clinical study

Data availability: The Cancer Genome Atlas 2015 RNA sequencing database (http://xena.ucsc.edu/getting-started/); Additional file 1: Table S7; Additional file 1: Table S8; Additional file 4: Figure S3; Additional file 5: Figure S4; Additional file 6: Figure S5
Code availability: -