circRNA basic information
circBase ID: hsa_circ_0000160
Name: hsa_circ_SUCO
Synonym: circ_0000160
Host Gene: SUCO
Genomic location(hg19): chr1:172520651-172526934:+
Genomic location(hg38): chr1:172551511-172557794:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ADAM9, CAND1, CNOT8, DACH1, EIF3J, RAP2C, RB1, VCAN, SUCO
Associated microRNA: miR-607, miR-127-5p, miR-1272, miR-1299, miR-1183, miR-217, miR-767-3p, miR-1256
Biological function: Potentially involved in axillary lymph node metastasis and cancer-related pathways; may serve as a biomarker to distinguish breast cancer with ALNM from without ALNM.
Molecular mechanism: Predicted ceRNA network (circRNA-miRNA-mRNA) involving multiple miRNAs and downstream mRNA targets; pathway enrichment suggests involvement in cancer-related pathways.
Biological pathway or process:

cell cycle (other); JAK/STAT (other); other pathway/process (other); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Decreased circ_0000160 is associated with ALNM; ROC AUC 0.7435 to discriminate tissues with ALNM from those without ALNM.

Description:

circ_0000160 is down-regulated in breast cancer tissues with axillary lymph node metastasis and shows diagnostic potential (AUC 0.7435) to distinguish ALNM-positive from ALNM-negative cases. Bioinformatics predicts circ_0000160 participates in a circRNA-miRNA-mRNA (ceRNA) network involving eight candidate miRNAs and cancer-related pathways such as cell cycle and JAK-STAT.

Confidence score:

0.5047

Other information
Title:

Decreased Expression of circ_0000160 in Breast Cancer With Axillary Lymph Node Metastasis.

Journal: Frontiers in molecular biosciences
Published: 2021
PubMed ID: 35211507
Study type:

combined biological and clinical study

Data availability: GSE173766
Code availability: -