circRNA basic information
circBase ID: hsa_circ_0061276
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr21:16415815-16415895:-
Genomic location(hg38): chr21:15043494-15043574:-
Subcellular localization: extracellular
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; gastric dysplasia tissues; adjacent non-tumorous tissues; plasma

Cell lines:

BGC-823; MGC-803; SGC-7901; GES-1

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Potential blood-based biomarker for gastric cancer diagnosis and prognosis; reduced levels are associated with clinicopathological features, distal metastasis, shorter overall survival, and postoperative recurrence monitoring.
Molecular mechanism: No mechanistic regulatory pathway was defined; the study suggests that gastric cancer cells may secrete this circRNA into plasma.
Biological pathway or process:

not specified

Detected method:
Q
M
Validation methods:

Microarray; Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Cohort Study; Survival Analysis; RT-ddPCR

Clinical significance:

Low plasma hsa_circ_0061276 was associated with shorter overall survival; postoperative recovery to normal levels was associated with longer disease-free survival; hsa_circ_0061276 contributed to diagnostic performance for gastric cancer, including combined plasma biomarkers.

Description:

hsa_circ_0061276 is downregulated in gastric cancer tissues and preoperative plasma and was one of the top reduced plasma circRNAs in the microarray profile. Its plasma level has diagnostic and prognostic value, with low expression indicating poorer overall survival and postoperative recovery indicating longer disease-free survival.

Confidence score:

0.6954

Other information
Title:

Plasma circular RNA profiling of patients with gastric cancer and their droplet digital RT-PCR detection.

Journal: Journal of molecular medicine (Berlin, Germany)
Published: 2018
PubMed ID: 29098316
Study type:

combined biological and clinical study

Data availability: GSE89143; GSE93541
Code availability: -