circRNA basic information
circBase ID: hsa_circ_0077837
Name: hsa_circ_EPB41L2
Synonym: circEPB41L2
Host Gene: EPB41L2
Genomic location(hg19): chr6:131247744-131277639:-
Genomic location(hg38): chr6:130926604-130956499:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary NSCLC tissues; adjacent tissues; LUAD tissues; tumour tissues

Cell lines:

A549; H23; H1299; H292; BEAS-2B; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PTBP1, TRIP12, Vimentin, PARP1, HMGA1, PKM1, PKM2, E-cadherin
Associated microRNA: -
Biological function: Inhibits NSCLC progression and metastasis, suppresses proliferation, migration and invasion, and blocks aerobic glycolysis.
Molecular mechanism: Acts as a scaffold binding PTBP1 and TRIP12 to promote TRIP12-mediated PTBP1 polyubiquitylation and proteasomal degradation, thereby reducing PKM2 and Vimentin and increasing PKM1 and E-cadherin.
Biological pathway or process:

glycolysis (inhibits); EMT (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits); ubiquitination (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ROC Analysis; RNA Pull-Down; circRIP; RIP (RNA Immunoprecipitation); Co-IP; Transfection; CCK8; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot

Clinical significance:

Downregulation of circEPB41L2 was relevant to unfavourable outcomes in NSCLC patients and showed diagnostic potential (AUC=0.75).

Description:

circEPB41L2 is down-regulated in NSCLC and acts as a tumor suppressor. It serves as a scaffold to recruit TRIP12 to PTBP1, promoting PTBP1 ubiquitination and proteasomal degradation, thereby inhibiting aerobic glycolysis and EMT and reducing NSCLC growth and metastasis.

Confidence score:

0.8872

Other information
Title:

circEPB41L2 blocks the progression and metastasis in non-small cell lung cancer by promoting TRIP12-triggered PTBP1 ubiquitylation.

Journal: Cell death discovery
Published: 2024
PubMed ID: 38341427
Study type:

combined biological and clinical study

Data availability: The datasets used or analysed during the current study are available from the corresponding author on reasonable request.
Code availability: -