circRNA basic information
circBase ID: hsa_circ_0043278
Name: hsa_circ_TADA2A
Synonym: -
Host Gene: TADA2A
Genomic location(hg19): chr17:35797838-35800763:+
Genomic location(hg38): chr17:37437737-37440662:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; paired noncancerous tissues; benign breast tumor tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-103a-2-5p, miR-302b-3p, miR-302c-3p, miR-455-3p, miR-520d-3p
Biological function: May play a role in breast cancer occurrence and progression; lower expression is associated with lymph node metastasis, invasive ductal carcinoma, and potential poorer prognosis; may serve as a promising diagnostic marker.
Molecular mechanism: Predicted ceRNA/miRNA sponge mechanism involving five putative target miRNAs; the interaction was not experimentally validated.
Biological pathway or process:

ceRNA regulation (other); metastasis (inhibits); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Downregulated expression is associated with lymph node metastasis and histological type; ROC AUC was 0.690, suggesting potential diagnostic value; low expression might be correlated with poorer prognosis.

Description:

This study identified hsa_circ_0043278 as a significantly down-regulated circRNA in human breast cancer tissues by microarray and validated its decreased expression by qRT-PCR in clinical samples. Its lower expression was associated with lymph node metastasis and histological type, and ROC analysis suggested potential diagnostic value. Bioinformatics prediction suggested that hsa_circ_0043278 may function through putative miRNA sponge interactions, but these interactions were not experimentally validated.

Confidence score:

0.5047

Other information
Title:

The decreased expression of hsa_circ_0043278 and its relationship with clinicopathological features of breast cancer.

Journal: Gland surgery
Published: 2020
PubMed ID: 33447555
Study type:

combined biological and clinical study

Data availability: Data Sharing Statement: Available at http://dx.doi. org/10.21037/gs-20-825
Code availability: -