circRNA basic information
circBase ID: hsa_circ_0043280
Name: hsa_circ_TADA2A
Synonym: -
Host Gene: TADA2A
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0006143
MONDO name: cervical squamous cell carcinoma
Disease details: cervical squamous cell carcinoma / CSCC
Disease DO ID:
3744
Disease MeSH ID:
-
Disease NCIt ID:
C4028
Disease ICD11 ID:
1544785014
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CSCC tissues; normal cervical tissues; tumor tissue

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: 22 mRNAs, 19 drugs/chemicals
Associated microRNA: hsa-miR-638
Biological function: May function as a competing endogenous RNA and play a vital role in CSCC development; may provide links to therapeutic targets through a circRNA-centered gene regulatory network.
Molecular mechanism: Potential ceRNA mechanism through hsa-miR-638 in a circRNA-miRNA-mRNA-chemical/drug network.
Biological pathway or process:

ceRNA regulation (other); PI3K/AKT (other); proliferation (other); drug resistance (other); other pathway/process (other)

Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis

Clinical significance:

May provide new insight into prognosis and therapy of CSCC, but no direct circRNA-specific survival association was validated.

Description:

hsa circ 0043280 is a downregulated CSCC-associated circRNA derived from TADA2A. The study predicts that it may act as a ceRNA by interacting with hsa-miR-638 and participate in a circRNA-miRNA-mRNA-drug/chemical regulatory network relevant to CSCC biology and therapy.

Confidence score:

0.1768

Other information
Title:

Building a circular RNA centered gene regulation network associated with cervical squamous cell carcinoma.

Journal: Epigenomics
Published: 2020
PubMed ID: 33215531
Study type:

bioinformatics study

Data availability: GSE102686; TCGA-CESC; GEO; TCGA; Supplementary Table 1; Supplementary Table 2; Supplementary Table 3
Code availability: -