circRNA basic information
circBase ID: hsa_circ_0119412
Name: hsa_circ_PER2
Synonym: hsa_circRNA_102958
Host Gene: PER2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paracancerous normal tissues

Cell lines:

GES-1; MKN74; HGC-27; GTL-16

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ZBED3, AGO2
Associated microRNA: miR-1298-5p
Biological function: promotes GC cell viability and invasion and tumor growth, and inhibits apoptosis
Molecular mechanism: hsa_circ_0119412 sponges miR-1298-5p to upregulate ZBED3 expression (ceRNA mechanism)
Biological pathway or process:

proliferation (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; Western Blot

Clinical significance:

hsa_circ_0119412 has the potential to be a molecular marker for GC screening.

Description:

hsa_circ_0119412 is up-regulated in gastric cancer tissues and cell lines and mainly localizes to the cytoplasm. It promotes GC cell viability/invasion and tumor growth while inhibiting apoptosis by acting as a ceRNA sponge for miR-1298-5p to increase ZBED3 expression.

Confidence score:

0.8119

Other information
Title:

Circular RNA hsa_circ_0119412 contributes to tumorigenesis of gastric cancer via the regulation of the miR-1298-5p/zinc finger BED-type containing 3 (ZBED3) axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35200111
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -