circRNA basic information
circBase ID: hsa_circ_0006168
Name: hsa_circ_CNOT6L
Synonym: circCNOT6L / circ_0006168
Host Gene: CNOT6L
Genomic location(hg19): chr4:78694234-78697546:-
Genomic location(hg38): chr4:77773080-77776392:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; normal tissues; adjacent normal tissues; tumors

Cell lines:

HET-1A; TE1; SKGT4

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: FN1
Associated microRNA: miR-384
Biological function: circCNOT6L promotes ESCC cell proliferation, iron metabolism disorder and tumor growth, and inhibits apoptosis.
Molecular mechanism: circCNOT6L acts as a competing endogenous RNA for miR-384 to modulate FN1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); apoptosis (inhibits); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; MTT; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

provided a theoretical basis and a potential target for the therapy of ESCC patients

Description:

circCNOT6L is up-regulated in ESCC tissues and cells and functions as an oncogenic circRNA. It promotes ESCC cell proliferation, iron metabolism disorder and tumor growth while suppressing apoptosis, at least partly by sponging miR-384 to increase FN1 expression.

Confidence score:

0.7785

Other information
Title:

Circular RNA circCNOT6L regulates cell development through modulating miR-384/FN1 axis in esophageal squamous cell carcinoma.

Journal: European review for medical and pharmacological sciences
Published: 2020
PubMed ID: 32329843
Study type:

combined biological and clinical study

Data availability: -
Code availability: -