circRNA basic information
circBase ID: hsa_circ_0037516
Name: hsa_circ_ABCA3
Synonym: -
Host Gene: ABCA3
Genomic location(hg19): chr16:2369581-2369841:-
Genomic location(hg38): chr16:2319580-2319840:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

fresh lung tissue specimens; NSCLC tissues; adjacent lung tissues

Cell lines:

A549; BEAS-2B; H1299; H460

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ABCA3
Associated microRNA: -
Biological function: Potential diagnostic biomarker for NSCLC; expression level may negatively correlate with lung cancer development.
Molecular mechanism: Detailed molecular mechanism unknown; possible relationship with ABCA3 locus/expression was explored but no correlation with ABCA3 expression was found.
Biological pathway or process:

not specified

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

The AUC of hsa_circ_0037516 was 0.82, with a sensitivity of 0.65 and a specificity of 0.84; the two circRNAs combined achieved AUC 0.9, suggesting diagnostic value for NSCLC.

Description:

hsa_circ_0037516 is derived from the ABCA3 locus and is significantly downregulated in NSCLC tissues and lung cancer cell lines. The study supports its potential diagnostic utility for NSCLC, with an individual ROC AUC of 0.82 and improved diagnostic performance when combined with hsa_circ_0037515.

Confidence score:

0.6238

Other information
Title:

Downregulated expression of hsa_circ_0037515 and hsa_circ_0037516 as novel biomarkers for non-small cell lung cancer.

Journal: American journal of translational research
Published: 2020
PubMed ID: 32051745
Study type:

combined biological and clinical study

Data availability: circBase datebase (http:// www.circbase.org/cgi-bin/simplesearch.cgi)
Code availability: -