circRNA basic information
circBase ID: hsa_circ_0001821
Name: hsa_circ_PVT1
Synonym: hsa_circRNA_000006
Host Gene: PVT1
Genomic location(hg19): chr8:128902834-128903244:+
Genomic location(hg38): chr8:127890588-127890998:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: Esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues and adjacent normal tissues; xenograft tumor tissues

Cell lines:

HET-1A; TE-1; TE-10; TE-11; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RUNX3, PVT1, BTRC, IKBA, AGO2
Associated microRNA: miR-423-5p
Biological function: Promotes ESCC cell proliferation, cell cycle progression, and tumor growth; knockdown suppresses proliferation and tumor growth and promotes G2/M cell cycle arrest.
Molecular mechanism: RUNX3 transcriptionally activates PVT1 to up-regulate circ_0001821; circ_0001821 acts as a ceRNA by sponging miR-423-5p to increase BTRC expression, promoting IKBA ubiquitination and activating NF-kappaB signaling.
Biological pathway or process:

NF-kappaB (promotes); proliferation (promotes); cell cycle (promotes); ceRNA regulation (promotes); ubiquitination (promotes)

Detected method:
Q
H
M
Validation methods:

Actinomycin D / DRB Stability Assay; RNase R Treatment; RT-qPCR; ISH (In Situ Hybridization); IHC (Immunohistochemistry); RIP (RNA Immunoprecipitation); RNA Pull-Down; Co-IP; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Cell Cycle Assay; In Vivo Animal Model; Western Blot; Bioinformatics Analysis

Clinical significance:

Potential biomarker for ESCC early detection or screening, but no convincing clinical sample validation was performed in this study.

Description:

circ_0001821 is up-regulated in ESCC cells and acts as an oncogenic circRNA. RUNX3 transcriptionally enhances PVT1/circ_0001821 expression, and circ_0001821 promotes ESCC proliferation, cell cycle progression, and tumor growth through the miR-423-5p/BTRC axis, increasing IKBA ubiquitination and activating NF-kappaB signaling.

Confidence score:

0.8363

Other information
Title:

Circ_0001821 Affects Proliferation and the Cell Cycle in Esophageal Squamous Cell Carcinoma by Elevating BTRC-Mediated IKBA Ubiquitination.

Journal: Molecular cancer research : MCR
Published: 2022
PubMed ID: 35913453
Study type:

combined biological and bioinformatics study

Data availability: GSE131969
Code availability: -