circRNA basic information
circBase ID: -
Name: hsa_circ_TRIM28
Synonym: circTRIM28
Host Gene: TRIM28
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; tumor-adjacent normal tissues; mice tumor tissue specimens

Cell lines:

MCF7; MDA-MB-231; MCF10A; MCF7/R; MDA-MB-231/R

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGA2, AGO2
Associated microRNA: miR-409-3p
Biological function: promotes tamoxifen resistance, proliferation, migration and invasion, and inhibits apoptosis in breast cancer; knockdown enhances tamoxifen sensitivity and suppresses tumor growth in vivo
Molecular mechanism: circTRIM28 acts as a ceRNA (miRNA sponge) for miR-409-3p, derepressing HMGA2
Biological pathway or process:

chemoresistance (promotes); proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Western Blot; divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Bioinformatics Analysis

Clinical significance:

High circTRIM28 expression is associated with lower post-operative survival and with advanced clinicopathologic features (TNM grade, lymph node metastasis, tumor size).

Description:

circTRIM28 is upregulated in breast cancer, particularly in tamoxifen-resistant tissues/cells, and high expression is associated with worse post-operative survival. Functionally, circTRIM28 promotes malignant behaviors and tamoxifen resistance by sponging miR-409-3p to increase HMGA2, while its knockdown enhances tamoxifen sensitivity and suppresses xenograft tumor growth.

Confidence score:

0.8819

Other information
Title:

Knockdown circTRIM28 enhances tamoxifen sensitivity via the miR-409-3p/HMGA2 axis in breast cancer.

Journal: Reproductive biology and endocrinology : RB&E
Published: 2022
PubMed ID: 36180890
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -