circRNA basic information
circBase ID: hsa_circ_0006988
Name: hsa_circ_LDLRAD3
Synonym: circ-LDLRAD3
Host Gene: LDLRAD3
Genomic location(hg19): chr11:36248634-36248980:+
Genomic location(hg38): chr11:36227084-36227430:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: MAP3K3, SLC1A5, IGF2, KDM1A
Associated microRNA: miR-491-5P, miR-137, miR-137-3p
Biological function: Potential oncogenic role in CRC (discussed), and is up-regulated in CRC patient blood.
Molecular mechanism: Discussed ceRNA mechanism: circ-LDLRAD3 may sponge miR-491-5P and miR-137/miR-137-3P to regulate targets such as MAP3K3, IGF2, SLC1A5 and potentially affect CRC progression.
Biological pathway or process:

ceRNA regulation (other); EMT (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis

Clinical significance:

circ-LDLRAD3 could be used as a diagnostic marker for CRC (AUC 76.8%, sensitivity 64%, specificity 95%).

Description:

circ-LDLRAD3 is significantly up-regulated in CRC patient blood compared with healthy controls and shows diagnostic value. The discussion suggests circ-LDLRAD3 may regulate CRC progression through ceRNA interactions with miR-491-5P and miR-137 family members, affecting targets such as MAP3K3, IGF2 and SLC1A5.

Confidence score:

0.4187

Other information
Title:

Expression status of circ-SMARCA5, circ-NOL10, circ-LDLRAD3, and circ-RHOT1 in patients with colorectal cancer.

Journal: Scientific reports
Published: 2023
PubMed ID: 37587156
Study type:

clinical study

Data availability: All data generated or analyzed during this study are included in this published article.
Code availability: -