circRNA basic information
circBase ID: hsa_circ_0072995
Name: hsa_circ_RGNEF
Synonym: circRGNEF
Host Gene: RGNEF
Genomic location(hg19): chr5:73069679-73076570:+
Genomic location(hg38): chr5:73773854-73780745:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues

Cell lines:

T24; UM-UC-3; EJ; J82; TCC; RT-4; SV-HUC; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: KIF2C
Associated microRNA: miR-548
Biological function: promotes BC cell proliferation, migration, invasion and metastasis; promotes tumor growth
Molecular mechanism: ceRNA mechanism: circRGNEF sponges miR-548 to enhance KIF2C expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RNase R Treatment; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; EdU Staining; CCK8; Colony Formation Assay; Transwell Assay; Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circRGNEF expression was correlated with aggressive BC phenotypes and poorer overall survival.

Description:

circRGNEF (hsa_circ_0072995) is up-regulated in bladder cancer tissues and cell lines and is mainly localized in the cytoplasm. It promotes proliferation, migration/invasion and metastasis by acting as a miR-548 sponge to increase KIF2C expression, and high circRGNEF levels are associated with aggressive clinicopathological features and poorer overall survival.

Confidence score:

0.8156

Other information
Title:

Circular RNA circRGNEF promotes bladder cancer progression via miR-548/KIF2C axis regulation.

Journal: Aging
Published: 2020
PubMed ID: 32305958
Study type:

combined biological and clinical study

Data availability: accession number: H1712024
Code availability: -