circRNA basic information
circBase ID: hsa_circ_0015278
Name: hsa_circ_KLHL20
Synonym: hsa_circ_100395
Host Gene: KLHL20
Genomic location(hg19): chr1:173726114-173744981:+
Genomic location(hg38): chr1:173756975-173775842:+
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008903
MONDO name: lung cancer
Disease details: lung cancer
Disease DO ID:
1324
Disease MeSH ID:
-
Disease NCIt ID:
C7377
Disease ICD11 ID:
-
Disease OMIM ID:
211980
Species: Human
Species details: Homo sapiens
Tissue specimen:

lung cancer tissues; normal lung tissues; non-tumor tissues; adjacent normal tissues; resected tumors

Cell lines:

A549; H460; PC9; H1299; H1975; SPC-A1; Beas-2B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: TCF21, KLHL20, Cyclin D1, Ki67
Associated microRNA: miR-1228
Biological function: hsa_circ_100395 acts as a tumor suppressor in lung cancer; its overexpression inhibits lung cancer cell proliferation, arrests cell-cycle progression, reduces migration and invasion, and suppresses tumor growth in vivo.
Molecular mechanism: hsa_circ_100395 sponges miR-1228 and promotes TCF21 expression, thereby regulating lung cancer cell proliferation, migration and invasion through the miR-1228/TCF21 pathway.
Biological pathway or process:

proliferation (inhibits); cell cycle (other); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Transfection; MTT; Cell Cycle Assay; Transwell Assay; RNA Pull-Down; Luciferase Reporter Assay; FISH / smFISH; Western Blot; In Vivo Animal Model

Clinical significance:

hsa_circ_100395 level was inversely correlated with TNM stage and metastases in lung cancer; low hsa_circ_100395 expression predicted poor prognosis, and higher expression predicted better prognosis.

Description:

hsa_circ_100395 is downregulated in lung cancer tissues and functions as a tumor suppressor. It inhibits proliferation, cell-cycle progression, migration, invasion, and xenograft tumor growth by sponging miR-1228 and regulating TCF21. Clinically, lower hsa_circ_100395 expression is associated with higher TNM stage, metastasis, and poorer prognosis.

Confidence score:

0.7855

Other information
Title:

CircRNA hsa_circ_100395 regulates miR-1228/TCF21 pathway to inhibit lung cancer progression.

Journal: Cell cycle (Georgetown, Tex.)
Published: 2018
PubMed ID: 30176158
Study type:

combined biological and clinical study

Data availability: GSE101586; GSE19804; circBase (http://www.circbase.org); miRBase (http://www.mirbase.org/); circinteractome (https://circinteractome.nia.nih.gov/); TargetScan; miRanda
Code availability: -