circRNA basic information
circBase ID: -
Name: -
Synonym: hsa_circRNA_102958
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; paired adjacent normal tissues; paired adjacent non-tumorous tissues; adjacent noncancerous tissues

Cell lines:

GES-1; SGC-7901; MKN-45; MGC-803; AGS; BGC-823

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: corresponding target mRNAs
Associated microRNA: hsa-miR-146b-3p, hsa-miR-23a-5p, hsa-miR-185-3p, hsa-miR-762, hsa-miR-637
Biological function: hsa_circRNA_102958 is up-regulated in gastric cancer tissues and cell lines, is associated with TNM stage, and may serve as a potential novel and stable diagnostic biomarker for gastric carcinoma.
Molecular mechanism: A predicted hsa_circRNA_102958-miRNA-mRNA interaction network suggests a possible ceRNA-related mechanism, but the interactions were predicted rather than experimentally validated.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

hsa_circRNA_102958 levels were positively associated with TNM stage, and ROC analysis showed an AUC of 0.74 with sensitivity 0.61 and specificity 0.86, suggesting potential diagnostic value in gastric cancer.

Description:

This study identified hsa_circRNA_102958 as an up-regulated circRNA in gastric cancer tissues and cell lines using microarray screening and qRT-PCR validation. Its expression was associated with TNM stage and showed moderate diagnostic performance by ROC analysis. The authors also predicted a hsa_circRNA_102958-miRNA-mRNA network involving five miRNAs, suggesting a possible ceRNA-related regulatory role.

Confidence score:

0.5963

Other information
Title:

Circular RNA hsa_circRNA_102958 may serve as a diagnostic marker for gastric cancer.

Journal: Cancer biomarkers : section A of Disease markers
Published: 2020
PubMed ID: 30689557
Study type:

combined biological and clinical study

Data availability: -
Code availability: -