circRNA basic information
circBase ID: -
Name: hsa_circ_DENND4C
Synonym: circDENND4C
Host Gene: DENND4C
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary invasive ductal carcinomas of breast; adjacent non-cancerous breast tissues; breast cancer tissue

Cell lines:

MCF-7; MDA-MB-231

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: HIF1alpha
Associated microRNA: -
Biological function: Promotes proliferation of breast cancer cells in a hypoxic environment; associated with tumor progression and larger tumor size.
Molecular mechanism: HIF1alpha-associated regulation under hypoxia; circDENND4C expression increases after hypoxia induction and decreases after HIF1alpha knockdown, mediating breast cancer cell proliferation in hypoxic conditions.
Biological pathway or process:

proliferation (promotes); HIF-1 signaling (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Western Blot; Bioinformatics Analysis

Clinical significance:

circDENND4C is highly expressed in breast cancer tissues, positively correlated with HIF1alpha mRNA level, associated with larger tumor size, and may be a substitutive biomarker for HIF1alpha in predicting the clinical impact of breast cancer.

Description:

circDENND4C is an HIF1alpha-associated circRNA up-regulated in breast cancer tissues and in breast cancer cells under hypoxia. Its knockdown suppresses proliferation of MDA-MB-231 cells specifically in hypoxic conditions, and its expression is positively correlated with HIF1alpha mRNA and larger tumor size, suggesting potential clinical biomarker value.

Confidence score:

0.5546

Other information
Title:

HIF1alpha-associated circDENND4C Promotes Proliferation of Breast Cancer Cells in Hypoxic Environment.

Journal: Anticancer research
Published: 2017
PubMed ID: 28739726
Study type:

combined biological and clinical study

Data availability: -
Code availability: -