circRNA basic information
circBase ID: -
Name: hsa_circ_FOXP1
Synonym: circ-FOXP1 / circRNA-FOXP1
Host Gene: FOXP1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018874
MONDO name: acute myeloid leukemia
Disease details: acute myeloid leukemia / AML
Disease DO ID:
9119
Disease MeSH ID:
D015470
Disease NCIt ID:
C3171
Disease ICD11 ID:
-
Disease OMIM ID:
601626
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow; bone marrow mononuclear cells

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: FOXP1
Associated microRNA: -
Biological function: Differentially expressed in AML and evaluated as a candidate biomarker for distinguishing AML patients from healthy donor controls; the authors speculated it might relate to FOXP1 transcription.
Molecular mechanism: The study speculated that circRNA-FOXP1 might promote transcription of its parental gene FOXP1, but did not experimentally validate this mechanism.
Biological pathway or process:

other pathway/process (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circ-FOXP1 distinguished AML patients from healthy donor controls, but was not correlated with risk stratification, complete remission, EFS or OS.

Description:

circ-FOXP1 was validated by RT-qPCR as down-regulated in AML BMMCs. It showed diagnostic potential for distinguishing AML patients from healthy controls, and the authors speculated that it might affect transcription of its parental gene FOXP1, but no direct mechanistic validation was provided.

Confidence score:

0.636

Other information
Title:

Circular RNA profile of acute myeloid leukaemia indicates circular RNA annexin A2 as a potential biomarker and therapeutic target for acute myeloid leukaemia.

Journal: American journal of translational research
Published: 2020
PubMed ID: 32509169
Study type:

combined clinical and bioinformatics study

Data availability: -
Code availability: -