circRNA basic information
circBase ID: hsa_circ_0004619
Name: hsa_circ_FAF1
Synonym: circ-FAF1
Host Gene: FAF1
Genomic location(hg19): chr1:51121113-51210447:-
Genomic location(hg38): chr1:50655441-50744775:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; peripheral blood samples

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: IGF2BP1, IGF2BP2, FAF1
Associated microRNA: hsa-miR-383, hsa-miR-485-3p
Biological function: Circ-FAF1 functions as a circulating diagnostic biomarker for breast cancer; its low serum expression is associated with lymph node spread, metastasis, estrogen receptor negativity, HER2 positivity, higher Ki-67 index, and clinicopathological parameters suggestive of worse outcome.
Molecular mechanism: Potential interaction with miRNAs and RNA-binding proteins was predicted bioinformatically; the study also relates circ-FAF1 to its host gene FAF1, a tumor suppressor involved in apoptosis and reduced invasion/metastasis.
Biological pathway or process:

metastasis (inhibits); invasion (inhibits); apoptosis (promotes); proliferation (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Serum circ-FAF1 is a promising diagnostic biomarker for breast cancer, with AUC 0.885, 81.67% diagnostic sensitivity and 76.67% diagnostic specificity; low expression correlates with lymph node spread, metastasis and worse-outcome clinicopathological parameters.

Description:

This case-control clinical study found that serum circ-FAF1 is significantly down-regulated in female breast cancer patients compared with healthy controls. Low circ-FAF1 expression is associated with lymph node spread, metastasis, ER negativity, HER2 positivity and higher Ki-67, and serum circ-FAF1 showed promising diagnostic performance by ROC analysis.

Confidence score:

0.459

Other information
Title:

Evaluation of the role of circular RNA (circ-FAF1) as a diagnostic biomarker for breast cancer in a cohort of Egyptian breast cancer patients.

Journal: Molecular biology reports
Published: 2025
PubMed ID: 39881045
Study type:

clinical study

Data availability: No datasets were generated or analysed during the current study; Supplementary file S1; Supplementary file S2; https:// doi. org/ 10. 1007/ s11033-024-10210-7
Code availability: -