circRNA basic information
circBase ID: hsa_circ_0030632
Name: hsa_circ_UGGT2
Synonym: -
Host Gene: UGGT2
Genomic location(hg19): chr13:96636057-96651561:-
Genomic location(hg38): chr13:95983803-95999307:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; matched tumor-adjacent normal tissues

Cell lines:

HIEC; HCT116; SW480; CACO2; SW620; HT29

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CCT2, DKC1, NAT10, HSPH1, HSPD1
Associated microRNA: hsa-miR-664b-3p, hsa-miR-139-5p, hsa-miR-6509-5p, hsa-miR-323a-3p, hsa-miR-370-3p, hsa-miR-181a-5p, hsa-miR-181b-5p
Biological function: Predicted oncogenic role in CRC; participates in regulation of telomere maintenance, posttranslational protein folding, apoptotic process and metabolic processes, and may promote tumor survival through anti-apoptotic effects.
Molecular mechanism: Predicted ceRNA mechanism in a circRNA/miRNA/mRNA regulatory network; hsa_circ_0030632 was predicted to regulate CRC-associated genes including CCT2, DKC1, NAT10, HSPH1, and HSPD1.
Biological pathway or process:

ceRNA regulation (other); apoptosis (inhibits); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; RNA-seq; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

May facilitate the finding of promising targets and biomarkers in CRC.

Description:

hsa_circ_0030632 is an up-regulated circRNA in CRC tissues and cell lines validated by qPCR. The study predicts that it acts through a circRNA/miRNA/mRNA regulatory network and may have an oncogenic role by regulating telomere maintenance, posttranslational protein folding, anti-apoptotic processes and metabolic programs.

Confidence score:

0.585

Other information
Title:

Identification of functional circRNA/miRNA/mRNA regulatory network for exploring prospective therapy strategy of colorectal cancer.

Journal: Journal of cellular biochemistry
Published: 2020
PubMed ID: 32115780
Study type:

combined biological and clinical study

Data availability: GSE116589; data included within the article and available from the corresponding author upon request
Code availability: -