circRNA basic information
circBase ID: hsa_circ_0001190
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr21:38792600-38794168:+
Genomic location(hg38): chr21:37420298-37421866:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric cancer tissues; paracancerous tissues; plasma

Cell lines:

MGC-803; GES-1

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: CDKN1A, MAP2K2, GADD45A, KLF2, NR3C1, PJA2, G6PC, PPP1CB
Associated microRNA: hsa-miR-323a-3p, hsa-miR-331-5p, hsa-miR-377, hsa-miR-485-3p, hsa-miR-889, hsa-miR-370
Biological function: Potential regulator and plasma biomarker for gastric cancer; predicted to participate in gastric cancer pathogenesis through a circRNA-miRNA-hub gene ceRNA network.
Molecular mechanism: Predicted ceRNA mechanism in which the circRNA may sponge miRNAs and regulate hub mRNAs involved in gastric cancer-related processes.
Biological pathway or process:

ceRNA regulation (other); cell cycle (other); apoptosis (other); immune regulation (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Potential novel plasma circRNA biomarker for gastric cancer.

Description:

hsa_circ_0001190 was identified as downregulated in both gastric cancer tissue and plasma and was confirmed as lower in MGC-803 gastric cancer cells than in GES-1 cells. The study proposes it as a potential plasma biomarker and predicted ceRNA regulator in gastric cancer through miRNA-hub gene networks.

Confidence score:

0.4032

Other information
Title:

Identification of downregulated circRNAs from tissue and plasma of patients with gastric cancer and construction of a circRNA-miRNA-mRNA network.

Journal: Journal of cellular biochemistry
Published: 2020
PubMed ID: 32052496
Study type:

combined biological and bioinformatics study

Data availability: GSE89143; GSE93541
Code availability: -