circRNA basic information
circBase ID: -
Name: hsa_circ_PDSS1
Synonym: circPDSS1
Host Gene: PDSS1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

MCF-7; MDA-MB-231; SKBR-3; BT-549; BT-474; MCF-10A

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CKAP5
Associated microRNA: miR-320c
Biological function: promotes proliferation, invasion, migration and EMT; inhibits apoptosis
Molecular mechanism: ceRNA mechanism: circPDSS1 sponges miR-320c to regulate CKAP5 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; TUNEL; Transwell Assay; Wound Healing Assay; IF (Immunofluorescence); Western Blot; Bioinformatics Analysis

Clinical significance:

-

Description:

circPDSS1 is up-regulated in breast cancer cell lines and acts as an oncogenic circRNA. It mainly localizes to the cytoplasm and promotes proliferation, invasion, migration, and EMT (and inhibits apoptosis) via a ceRNA mechanism by sponging miR-320c to upregulate CKAP5.

Confidence score:

0.7923

Other information
Title:

CircPDSS1 promotes the proliferation, invasion, migration, and EMT of breast cancer cell via regulating miR-320c/CKAP5 axis.

Journal: Cancer cell international
Published: 2022
PubMed ID: 35902921
Study type:

biological research

Data availability: -
Code availability: -