circRNA basic information
circBase ID: hsa_circ_0049027
Name: hsa_circ_HuR
Synonym: Circ-HuR
Host Gene: HuR
Genomic location(hg19): chr19:8032448-8046070:-
Genomic location(hg38): chr19:7967564-7981186:-
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; adjacent normal (peritumor) tissue

Cell lines:

AGS; MKN-45; MKN-74; NCI-N87; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: CNBP, HuR, CCND2, CTNNB1, MMP-14, c-Myc
Associated microRNA: -
Biological function: Suppresses gastric cancer cell growth, invasion, and metastasis; acts as a tumor suppressor.
Molecular mechanism: circ-HuR binds CNBP and restrains CNBP binding to the HuR promoter, reducing HuR transcription/expression and repressing tumor progression.
Biological pathway or process:

proliferation (inhibits); invasion (inhibits); metastasis (inhibits); angiogenesis (inhibits); other pathway/process (inhibits)

Detected method:
Q
Validation methods:

divergent primers PCR; Sanger Sequencing; RNase R Treatment; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; MTT; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis

Clinical significance:

Lower circ-HuR expression was associated with lower survival probability of gastric cancer patients; circ-HuR levels were a prognostic factor (HR=0.616).

Description:

circ-HuR (hsa_circ_0049027), a HuR-derived nuclear circRNA, is down-regulated in gastric cancer and suppresses malignant phenotypes (growth, invasion, metastasis) in vitro and in vivo. It directly binds CNBP and inhibits CNBP transactivation on the HuR promoter, thereby reducing HuR expression and downstream oncogenic effects; low circ-HuR is associated with worse patient survival.

Confidence score:

0.8791

Other information
Title:

Circ-HuR suppresses HuR expression and gastric cancer progression by inhibiting CNBP transactivation.

Journal: Molecular cancer
Published: 2019
PubMed ID: 31718709
Study type:

combined biological and clinical study

Data availability: Additional files; 10.1186/s12943-019-1094-z
Code availability: -