circRNA basic information
circBase ID: hsa_circ_0076092
Name: hsa_circ_SCUBE3
Synonym: circSCUBE3
Host Gene: SCUBE3
Genomic location(hg19): chr6:35195356-35201078:+
Genomic location(hg38): chr6:35227579-35233301:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

normal gastric mucosal tissues; GC tissues; cancerous and paracancerous tissues; subcutaneous tumors

Cell lines:

GES-1; HGC-27; MKN-45; NCI-N87

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SLC7A5, PD-L1, AGO2
Associated microRNA: miR-744-5p
Biological function: Promotes GC cell proliferation and immune escape; attenuates the anti-tumor effect of anti-PD-L1 in vivo; circSCUBE3 knockdown suppresses GC immune escape and can enhance the anti-tumor effect of PD-L1-neutralizing antibody.
Molecular mechanism: circSCUBE3 acts as a miR-744-5p sponge to upregulate SLC7A5, thereby regulating PD-L1 expression and affecting GC immune escape and anti-PD-L1 response.
Biological pathway or process:

proliferation (promotes); immune regulation (promotes); ceRNA regulation (promotes); drug resistance (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; Bioinformatics Analysis; Clinical Sample Validation; Actinomycin D / DRB Stability Assay; RNase R Treatment; Transfection; Colony Formation Assay; EdU Staining; Flow Cytometry(Non-apoptosis/cycle); ELISA; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; Cohort Study; Survival Analysis

Clinical significance:

circSCUBE3 high expression is associated with lymph node metastasis, TNM staging, and worse 5-year survival in GC patients; targeted knockdown may enhance the efficacy of PD-L1-neutralizing antibodies.

Description:

circSCUBE3 is an up-regulated human circRNA in gastric cancer derived from the SCUBE3 gene. It promotes GC cell proliferation and immune escape through the circSCUBE3/miR-744-5p/SLC7A5 axis, regulates PD-L1 expression, and reduces the anti-tumor activity of anti-PD-L1 treatment in vivo. High circSCUBE3 expression is associated with lymph node metastasis, TNM staging, and worse 5-year survival.

Confidence score:

0.8465

Other information
Title:

CircSCUBE3 Reduces the Anti-gastric Cancer Activity of Anti-PD-L1.

Journal: Molecular biotechnology
Published: 2024
PubMed ID: 37052807
Study type:

combined biological and clinical study

Data availability: GSM2005868-GSM2005879; circmine; https://starbase.sysu.edu.cn
Code availability: -