circRNA basic information
circBase ID: hsa_circ_0001307
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002974
MONDO name: cervical cancer
Disease details: cervical cancer / CC
Disease DO ID:
4362
Disease MeSH ID:
-
Disease NCIt ID:
C9311
Disease ICD11 ID:
1256072522
Disease OMIM ID:
603956
Species: Human
Species details: Homo sapiens
Tissue specimen:

CC tissues; normal tissues; tumor tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: CXCL8
Associated microRNA: hsa-miR-4428, hsa-miR-4433a-3p, hsa-miR-4667-5p, hsa-miR-4780, hsa-miR-5006-5p, hsa-miR-5588-5p, hsa-miR-6875-3p, hsa-miR-6891-5p, hsa-miR-885-3p
Biological function: Might upregulate CXCL8 by adsorbing miRNAs and was associated with immune cell infiltration in cervical cancer.
Molecular mechanism: Predicted ceRNA mechanism in which hsa circ 0001307 may sponge miRNAs to upregulate CXCL8.
Biological pathway or process:

ceRNA regulation (promotes); immune regulation (other); inflammation (promotes)

Detected method:
S
Validation methods:

circRNA-seq; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

hsa circ 0001307 was identified as an up-regulated cervical cancer circRNA in the predicted circRNA-miRNA-CXCL8 network. The study suggests that it may regulate CXCL8 through miRNA sponging and that it is associated with monocytes, activated mast cells and activated memory CD4 T cells.

Confidence score:

0.3991

Other information
Title:

Identification of an immune signature to predict poor clinical outcome in cervical cancer.

Journal: Epigenomics
Published: 2021
PubMed ID: 33955785
Study type:

combined clinical and bioinformatics study

Data availability: TCGA; GSE55478; GSE44001; GSE63514; UCSC Xena
Code availability: All data and codes are available from the authors upon reasonable request by contacting, S Wang (shizhiwang2009@seu.edu.cn).