circRNA basic information
circBase ID: -
Name: hsa_circ_SIPA1L1
Synonym: circSIPA1L1
Host Gene: SIPA1L1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005381
MONDO name: bone disorder
Disease details: bone regeneration
Disease DO ID:
0080001
Disease MeSH ID:
D001847
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

dental pulp

Cell lines:

HEK-293 T / 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: Smad3
Associated microRNA: miR-617
Biological function: promotes osteogenesis of DPSCs
Molecular mechanism: ceRNA (miRNA sponge) mechanism: circSIPA1L1 sponges miR-617 to regulate Smad3 (phosphorylated Smad3)
Biological pathway or process:

ceRNA regulation (promotes); TGF-beta/SMAD (promotes); osteogenesis (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; Western Blot; IF (Immunofluorescence); CCK8; EdU Staining; Cell Cycle Assay; ALP staining; In Vivo Animal Model; H&E Staining

Clinical significance:

potential therapeutic strategies for the bone regeneration through targeting osteogenesis of DPSCs

Description:

circSIPA1L1 is upregulated during osteogenic differentiation of dental pulp stem cells and promotes osteogenesis. Mechanistically, it acts as a miRNA sponge for miR-617 in the cytoplasm, relieving repression on Smad3 (including phosphorylated Smad3) and enhancing osteogenic marker expression and mineralization, supported by in vitro assays and a nude mouse subcutaneous implantation model.

Confidence score:

0.7263

Other information
Title:

Circular RNA SIPA1L1 promotes osteogenesis via regulating the miR-617/Smad3 axis in dental pulp stem cells.

Journal: Stem cell research & therapy
Published: 2020
PubMed ID: 32831141
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -