circRNA basic information
circBase ID: -
Name: hsa_circ_UBAP2
Synonym: hsa_circMMD_007
Host Gene: UBAP2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

lung adenocarcinoma tissues; normal tissues

Cell lines:

A549; NCI-H1299; NCI-H1395; NCL-H460; HNBE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PTPN9
Associated microRNA: miR-197-3p
Biological function: promotes tumorigenesis, proliferation, migration and invasion; promotes chemoresistance
Molecular mechanism: circMMD_007 negatively regulates miR-197-3p and thereby increases PTPN9 expression (ceRNA-like axis) to promote oncogenic phenotypes
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); chemoresistance (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model

Clinical significance:

circMMD_007 expression was higher in advanced stages and associated with lymph node metastasis and distant metastasis status

Description:

circMMD_007 is up-regulated in lung adenocarcinoma and its higher level associates with more advanced clinical stages/metastasis. Functionally, circMMD_007 promotes tumor cell growth, migration/invasion, and increases chemotherapy drug survival, partly by sponging miR-197-3p to relieve repression of PTPN9 (circMMD_007/miR-197-3p/PTPN9 axis).

Confidence score:

0.8119

Other information
Title:

CircMMD_007 promotes oncogenic effects in the progression of lung adenocarcinoma through microRNA-197-3p/protein tyrosine phosphatase non-receptor type 9 axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35156900
Study type:

combined biological and clinical study

Data availability: The datasets used and analyzed in the current study are available from the corresponding author in response to reasonable requests.
Code availability: -