circRNA basic information
circBase ID: -
Name: ebv_circ_RPMS1
Synonym: circRPMS1
Host Gene: RPMS1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Virus
Species details: Human gammaherpesvirus 4 / Epstein-Barr virus
Tissue specimen:

NPC tissues; adjacent tissues

Cell lines:

NP69; C666-1; HNE2; HNE2-EBV+

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: E-cadherin, N-cadherin, vimentin
Associated microRNA: miR-203, miR-31, miR-451, miR-200, miR-9
Biological function: promotes proliferation and invasion, inhibits apoptosis, promotes EMT and tumor growth/metastasis in EBV-positive NPC
Molecular mechanism: circRPMS1 acts as a miRNA sponge (ceRNA-like) for miR-203/miR-31/miR-451 to promote EMT and oncogenic phenotypes in NPC
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Survival Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; BrdU; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; In Vivo Animal Model

Clinical significance:

circRPMS1 was increased in metastatic NPC and associated with short survival outcome; high circRPMS1 predicted poor survival outcome and may be a useful biomarker for NPC diagnosis and prognosis

Description:

EBV-encoded circRPMS1 is up-regulated in EBV-positive and metastatic NPC and correlates with shorter OS/DFS. Functionally, circRPMS1 promotes NPC cell proliferation, invasion, tumor growth and EMT while suppressing apoptosis, mainly by sponging miR-203/miR-31/miR-451 (and reported binding to additional miRNAs in screening).

Confidence score:

0.7365

Other information
Title:

Knockdown of EBV-encoded circRNA circRPMS1 suppresses nasopharyngeal carcinoma cell proliferation and metastasis through sponging multiple miRNAs.

Journal: Cancer management and research
Published: 2019
PubMed ID: 31695488
Study type:

combined biological and clinical study

Data availability: -
Code availability: -