circRNA basic information
circBase ID: hsa_circ_0003596
Name: hsa_circ_COL5A1
Synonym: -
Host Gene: COL5A1
Genomic location(hg19): chr9:137716445-137717750:+
Genomic location(hg38): chr9:134824599-134825904:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
 4467
Disease MeSH ID:
 -
Disease NCIt ID:
 C4033
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

CCRCC tissues; normal samples; matched non-tumor tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0003596 was found upregulated in CCRCC microarray analysis and was part of the circRNA set used to build the circRNA-miRNA-mRNA regulatory network.
Confidence score:

0.1768
Other information
Title:

Construction and analysis of circular RNA molecular regulatory networks in clear cell renal cell carcinoma.

Journal: Molecular medicine reports
Published: 2020
PubMed ID: 31746384
Study type:

bioinformatics study
Data availability: GSE100186; TCGA
Code availability: -