circRNA basic information
circBase ID: -
Name: hsa_circ_NOTCH1
Synonym: hsa_circRNA15994-13
Host Gene: NOTCH1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: extracellular
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005030
MONDO name: fetal growth restriction
Disease details: Small for gestational age / SGA
Disease DO ID:
-
Disease MeSH ID:
D005317
Disease NCIt ID:
C114875
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

neonatal umbilical cord plasma; maternal blood plasma; placental tissue

Cell lines:

A549

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: beta-catenin
Associated microRNA: hsa-miR-3619-5p, hsa-miR-4741
Biological function: May influence the development of SGA; predicted to regulate the Wnt/beta-catenin pathway through hsa-miR-3619-5p.
Molecular mechanism: Predicted ceRNA mechanism involving hsa_circRNA15994-13, hsa-miR-3619-5p and beta-catenin/Wnt signaling.
Biological pathway or process:

Wnt/beta-catenin (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Differential expression in umbilical cord and maternal blood plasma may provide a basis for predicting fetal plasma content in maternal plasma and may provide new mechanism ideas and control targets for SGA.

Description:

hsa_circRNA15994-13 was differentially expressed in SGA, with increased levels in umbilical cord and maternal plasma and decreased levels in SGA placental tissue. The study predicts that it may act through a hsa_circRNA15994-13/hsa-miR-3619-5p/beta-catenin regulatory network affecting Wnt/beta-catenin signaling in SGA.

Confidence score:

0.6193

Other information
Title:

Differentially expressed circular RNAs in maternal and neonatal umbilical cord plasma from SGA compared with AGA.

Journal: Journal of cellular biochemistry
Published: 2020
PubMed ID: 31385350
Study type:

combined clinical and bioinformatics study

Data availability: GSE93174
Code availability: -