circRNA basic information
circBase ID: hsa_circ_0006168
Name: hsa_circ_CNOT6L
Synonym: circ0006168
Host Gene: CNOT6L
Genomic location(hg19): chr4:78694234-78697546:-
Genomic location(hg38): chr4:77773080-77776392:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; paracancerous tissues; matched normal tissues; paired noncancerous tissues

Cell lines:

TE13; ECA109; Kyse150; Kyse450; Kyse510; Het-1A

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: mTOR, AGO2, CNOT6L
Associated microRNA: miR-100
Biological function: Promotes ESCC cell proliferation, migration and invasion; associated with lymph node metastasis and advanced TNM stage.
Molecular mechanism: hsa_circ_0006168 acts through a ceRNA mechanism by sponging miR-100 and regulating mTOR expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Bioinformatics Analysis

Clinical significance:

High hsa_circ_0006168 expression was positively connected with lymph node metastasis and TNM stage; hsa_circ_0006168 can serve as a potential diagnostic biomarker, prognostic biomarker, and therapeutic target for ESCC.

Description:

hsa_circ_0006168 is up-regulated in ESCC tissues and cell lines and is associated with lymph node metastasis and advanced TNM stage. Functionally, it promotes ESCC cell proliferation, migration and invasion. Mechanistically, it acts as a ceRNA by sponging miR-100 and regulating mTOR expression, suggesting potential biomarker and therapeutic relevance.

Confidence score:

0.8324

Other information
Title:

hsa_circ_0006168 sponges miR-100 and regulates mTOR to promote the proliferation, migration and invasion of esophageal squamous cell carcinoma.

Journal: Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie
Published: 2019
PubMed ID: 31229921
Study type:

combined biological and clinical study

Data availability: -
Code availability: -