circRNA basic information
circBase ID: hsa_circ_0004873
Name: hsa_circ_OXCT1
Synonym: circ-OXCT1
Host Gene: OXCT1
Genomic location(hg19): chr5:41794104-41807540:-
Genomic location(hg38): chr5:41794002-41807438:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paracancerous specimens

Cell lines:

AGS; MGC803; MKN45; HEK-293T; MKN28; BGC823; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: SMAD4, E-CAD, N-CAD, VIM
Associated microRNA: miR-136
Biological function: Suppresses EMT and metastasis (migration, invasion, lung metastasis); no significant effect on proliferation
Molecular mechanism: ceRNA mechanism: circ-OXCT1 sponges miR-136 to regulate SMAD4 and modulate TGF-beta/Smad-induced EMT markers (E-CAD, N-CAD, VIM).
Biological pathway or process:

TGF-beta/SMAD (inhibits); EMT (inhibits); metastasis (inhibits); migration (inhibits); invasion (inhibits); proliferation (other); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; divergent primers PCR; Sanger Sequencing; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; H&E Staining; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Lower circ-OXCT1 level indicated a shorter 5-year overall survival; expression correlated with lymph node metastasis and pathological stage.

Description:

In gastric cancer, circ-OXCT1 is down-regulated and acts as a tumor suppressor for EMT and metastasis. Mechanistically, it sponges miR-136 in the cytoplasm to modulate SMAD4 and attenuate TGF-beta/Smad-driven EMT marker changes, reducing migration, invasion, and lung metastasis in vivo. Low circ-OXCT1 expression is associated with advanced clinicopathologic features and worse overall survival.

Confidence score:

0.8557

Other information
Title:

Circ-OXCT1 Suppresses Gastric Cancer EMT and Metastasis by Attenuating TGF-beta Pathway Through the Circ-OXCT1/miR-136/SMAD4 Axis.

Journal: OncoTargets and therapy
Published: 2020
PubMed ID: 32523351
Study type:

combined biological and clinical study

Data availability: -
Code availability: -