circRNA basic information
circBase ID: hsa_circ_0004846
Name: hsa_circ_SAMD4A
Synonym: circ_101356 / circSAMD4
Host Gene: SAMD4A
Genomic location(hg19): chr14:55168779-55169298:+
Genomic location(hg38): chr14:54702061-54702580:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissues; adjacent non-cancerous tissues; metastatic tissues; non-metastatic tissues

Cell lines:

hFOB 1.19; MG-63; U2OS; HOS; 143B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MDM2, CD133, SOX2, CD90, CD44
Associated microRNA: miR-1244
Biological function: Promotes osteosarcoma cell proliferation in vivo and in vitro and enhances osteosarcoma cell stemness features.
Molecular mechanism: circSAMD4A functions as a miR-1244 sponge and regulates the downstream miR-1244 target MDM2, forming a circSAMD4A/miR-1244/MDM2 regulatory loop.
Biological pathway or process:

proliferation (promotes); stemness (promotes); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Flow Cytometry(Non-apoptosis/cycle); In Vivo Animal Model; Nuclear-Cytoplasmic Fractionation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circSAMD4A expression is associated with metastatic tissues and decreased recurrence-free survival, suggesting potential prognostic and therapeutic relevance in osteosarcoma.

Description:

circSAMD4A/hsa_circ_0004846 is up-regulated in osteosarcoma tissues and cell lines and is associated with metastasis and poorer recurrence-free survival. Functionally, it promotes osteosarcoma proliferation and stemness in vitro and accelerates xenograft tumor growth in vivo. Mechanistically, circSAMD4A mainly localizes in the cytoplasm and acts as a miR-1244 sponge to regulate MDM2 expression through a circSAMD4A/miR-1244/MDM2 axis.

Confidence score:

0.8562

Other information
Title:

CircSAMD4A accelerates cell proliferation of osteosarcoma by sponging miR-1244 and regulating MDM2 mRNA expression.

Journal: Biochemical and biophysical research communications
Published: 2019
PubMed ID: 31200957
Study type:

combined biological and clinical study

Data availability: GSE96964; GEO
Code availability: -