circRNA basic information
circBase ID: hsa_circ_0008717
Name: hsa_circ_ABCB10
Synonym: circ-ABCB10
Host Gene: ABCB10
Genomic location(hg19): chr1:229665945-229678118:-
Genomic location(hg38): chr1:229530198-229542371:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissue; adjacent noncancerous tissue

Cell lines:

MCF-7; MDA-MB-231; MDA-MB-468; MDA-MB-453; MCF-10A; HEK-293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-1271
Biological function: promotes breast cancer cell proliferation and progression, supports cell cycle progression, and inhibits apoptosis
Molecular mechanism: circ-ABCB10 acts as a miRNA sponge for miR-1271 in breast cancer tumorigenesis
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay

Clinical significance:

-

Description:

circ-ABCB10 is a human ABCB10-derived circRNA that is significantly up-regulated in breast cancer tissues and cell lines. It acts as an oncogenic circRNA by promoting proliferation and cell cycle progression while suppressing apoptosis, at least partly through sponging miR-1271.

Confidence score:

0.7785

Other information
Title:

Circular RNA circ-ABCB10 promotes breast cancer proliferation and progression through sponging miR-1271.

Journal: American journal of cancer research
Published: 2017
PubMed ID: 28744405
Study type:

combined biological and clinical study

Data availability: -
Code availability: -