circRNA basic information
circBase ID: hsa_circ_0001649
Name: -
Synonym: hsa_circ_001599
Host Gene: -
Genomic location(hg19): chr6:146209155-146216113:-
Genomic location(hg38): chr6:145888019-145894977:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent non-tumor tissues

Cell lines:

HepG2; HCCLM9; HCCLM3; MHCC97L; L02

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Over-expression of hsa_circ_0001649 inhibits proliferation, migration, and invasion and promotes apoptosis of HCC cells; low expression is associated with poor overall survival.
Molecular mechanism: The exact underlying mechanism of hsa_circ_0001649 in regulating HCC progression was not determined in this study.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Transwell Assay; Cohort Study; Survival Analysis

Clinical significance:

Low hsa_circ_0001649 expression was associated with poor overall survival, and hsa_circ_0001649 was identified as an independent favorable predictor and novel prognostic biomarker for HCC patients.

Description:

In this study, hsa_circ_0001649 was significantly down-regulated in HCC tissues and several HCC cell lines. Low expression predicted poorer overall survival, while high expression was favorable. Functional assays showed that hsa_circ_0001649 over-expression suppresses HCC cell proliferation, migration and invasion and promotes apoptosis, suggesting a tumor-suppressive role and potential prognostic/therapeutic value.

Confidence score:

0.6527

Other information
Title:

Down-regulation of hsa_circ_0001649 in hepatocellular carcinoma predicts a poor prognosis.

Journal: Cancer biomarkers : section A of Disease markers
Published: 2018
PubMed ID: 29630526
Study type:

combined biological and clinical study

Data availability: -
Code availability: -