circRNA basic information
circBase ID: hsa_circ_0017639
Name: -
Synonym: circ_0017639 / hsa_circRNA_100542
Host Gene: -
Genomic location(hg19): chr10:7290509-7327916:-
Genomic location(hg38): chr10:7248547-7285954:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC samples; adjacent normal samples; xenograft tumors

Cell lines:

HBE; HEK-293 T; H460; H1650; A549; H1299; A549/DDP; H1299/DDP

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SIX1
Associated microRNA: miR-1296-5p
Biological function: promotes cisplatin resistance and tumor growth; represses apoptosis; promotes proliferation, invasion, and migration in DDP-resistant NSCLC cells
Molecular mechanism: ceRNA mechanism: circ_0017639 sponges miR-1296-5p to elevate SIX1 expression
Biological pathway or process:

chemoresistance (promotes); apoptosis (inhibits); proliferation (promotes); invasion (promotes); migration (promotes); tumor growth (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; Luciferase Reporter Assay; MTT; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

circ_0017639 is overexpressed in DDP-resistant NSCLC samples compared to DDP-sensitive samples

Description:

In DDP-resistant NSCLC, circ_0017639 is up-regulated and mainly localized in the cytoplasm. It promotes cisplatin resistance and malignant phenotypes by sponging miR-1296-5p, thereby increasing SIX1 expression, and its knockdown sensitizes tumors/cells to DDP and inhibits tumor growth in vivo.

Confidence score:

0.7956

Other information
Title:

Hsa_circ_0017639 regulates cisplatin resistance and tumor growth via acting as a miR-1296-5p molecular sponge and modulating sine oculis homeobox 1 expression in non-small cell lung cancer.

Journal: Bioengineered
Published: 2022
PubMed ID: 35287543
Study type:

combined biological and clinical study

Data availability: GSE112214
Code availability: -